BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G05LP1|AL429105
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig445 196 5e-50
3x_Contig1588 190 3e-48
>3x_Contig445
Length = 1719
Score = 196 bits (99), Expect = 5e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 687 tcttattcctcgtggcccaatggtcacggcgtctggctacgatgttagctacttctgaaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 tcttattcctcgtggcccaatggtcacggcgtctggctacgatgttagctacttctgaaa 1350
Query: 747 ccagaagattccaggttcgagtcctggcggggaagattt 785
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ccagaagattccaggttcgagtcctggcggggaagattt 1389
>3x_Contig1588
Length = 14692
Score = 190 bits (96), Expect = 3e-48
Identities = 96/96 (100%)
Strand = Plus / Minus
Query: 687 tcttattcctcgtggcccaatggtcacggcgtctggctacgatgttagctacttctgaaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7345 tcttattcctcgtggcccaatggtcacggcgtctggctacgatgttagctacttctgaaa 7286
Query: 747 ccagaagattccaggttcgagtcctggcggggaaga 782
||||||||||||||||||||||||||||||||||||
Sbjct: 7285 ccagaagattccaggttcgagtcctggcggggaaga 7250
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7220
Number of Sequences: 1807
Number of extensions: 7220
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)